BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013C02SP1|AL426486
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1566 1624 0.0
>3x_Contig1566
Length = 10355
Score = 1624 bits (816), Expect = 0.0
Identities = 837/846 (98%), Gaps = 1/846 (0%)
Strand = Plus / Plus
Query: 3 ttctttgttctgaagtttgtcatttgaggaatcaaaatttgtcacatcactattgaatca 62
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1019 ttctttgttctgaagtttgtcatttgaggaatcaaaatttgtcacatcactattgattca 1078
Query: 63 tcctttttacagatctgacttttttttcgttttttgcacagaggaggaaagccgaaaacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 tcctttttacagatctgacttttttttcgttttttgcacagaggaggaaagccgaaaacc 1138
Query: 123 ttaatagtgcctaacgtctaaaaaaagaaaacaacaaagagtaatgtcatccaatatgtc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 ttaatagtgcctaacgtctaaaaaaagaaaacaacaaagagtaatgtcatccaatatgtc 1198
Query: 183 gaaaaacatcaacgagagttttaaagaccgtattgtgattaatgaattcacccaatgagt 242
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1199 gaaaaacatcaacgagagttttaaagaccgtattgtgattaatga-ttcacccaatgagt 1257
Query: 243 caggtgaaatattaaggcaaaggtcgaatgaaactgaaaaccaaaccaaaaataaagaag 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1258 caggtgaaatattaaggcaaaggtcgaatgaaactgaaaaccaaaccaaaaataaagagg 1317
Query: 303 aaaatwcttcagataaacctgtcatcaatttagaaaaggaattgactgctcttaaaatcg 362
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1318 aaatttcttcagataaacctgtcatcaatttagaaaaggaattgactgctcttaaaatcg 1377
Query: 363 accgtcaatcattgttagatgataatttaacaaacttgctgccagaacagctttctgaaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1378 accgtcaatcattgttagatgataatttaacaaacttgctgccagaacagctttctgaaa 1437
Query: 423 tagcaagtgaatcagaaacagattcagatgaggatactactaatttgttggatgaaccgt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 tagcaagtgaatcagaaacagattcagatgaggatactactaatttgttggatgaaccgt 1497
Query: 483 ctccaagatcctctgatgacccttccttttcaagaccatcgtcttgtattttcgttgcgt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 ctccaagatcctctgatgacccttccttttcaagaccatcgtcttgtattttcgttgcgt 1557
Query: 543 ctttagcggccactcttagtgattccgaactcaacgcatccgtgacaaaagagtttgcga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1558 ctttagcggccactcttagtgattccgaactcaacgcatccgtgacaaaagagtttgcga 1617
Query: 603 aatatggtaaaattgtgtctgtgaaartattrcgtgatccagcaaamargccttacgcat 662
|||||||||||||||||||||||||| |||| |||||||||||||| | |||||||||||
Sbjct: 1618 aatatggtaaaattgtgtctgtgaaagtattgcgtgatccagcaaacaggccttacgcat 1677
Query: 663 ttgttcaatatgcatcagacgatgaagcattgaatgcgttatctcaagctcaaggtacaa 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1678 ttgttcaatatgcatcagacgatgaagcattgaatgcgttatctcaagctcaaggtacaa 1737
Query: 723 cgttaaacaatagaaatattcgttgtgaaagagcaaaggtcaacagaactgtattcatct 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1738 cgttaaacaatagaaatattcgttgtgaaagagcaaaggtcaacagaactgtattcatct 1797
Query: 783 cgtcaagttttgctaatccactagagggaaaattaactgttgaaaaagtggtagatttga 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1798 cgtcaagttttgctaatccactagagggaaaattaactgttgaaaaagtggtagatttga 1857
Query: 843 tgagta 848
||||||
Sbjct: 1858 tgagta 1863
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7779
Number of Sequences: 1807
Number of extensions: 7779
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)